Protein PVX_089660 (PlasmoDB link) - New domain SMC_hinge (Pfam link)

Sequence and domain localizations (colored) at: 505...633 

   1 MYIKQIKLKGFRTYKNETTIDFTKGINCIVGFNGSGKSNILLAIEFILSDMCEYKQVFLH   60
  61 EGIGSAVRSCYVEIIFDNSEKYFSMFKENEIKIKKVMENMKCEIYVNEKNISKNQYVELL  120
 121 ESCGLCVNNLYNIIKQGQIIKLSNMKDEEILNYLKSILGAKIFEEKKKDALSMLKECDAK  180
 181 KGTIEKEFQEMNAKLESLQAEFEHFLAYKKLEKEKVHLEYHLNEINYKNVYKETQTLKSK  240
 241 LQELKNKTQDEDNNLSVSNNTKSEYTEQLNKMKLEIVSYQNELDKSVSEEIQNKRNIIHL  300
 301 EILIDEKRKEKKLKESKNKSKIENLNQINDFILRVNEKLQSLKSVINLKEREIEDKHSEI  360
 361 NMLLSMNQTKNPKDGNYSHNVKKIEKMIGDINTELSALEKEAIKNEKYLQELEEESKLLK  420
 421 NSVQENKTLSEKCADEISQLNSKSEICVEHKRQFQQKISEGTANLNVVKSQLIEVNDKYE  480
 481 EMVKSSNKEIVKMVQLILEDSSIHKENVLGFLIDNINVEKTYVKAVDTVLENHYFTLIVE  540
 541 DMKTAKKIVEFIEKKREEKKKKEFEFKDFFFGKLTIVPLLNIRKYSDFTYPNDKNMVPLI  600
 601 NCVNYNTKIYEFLKSILFKTVIVKSLECCQNYLEENYNCVNIDGDYMTKQGFMYGGYSKK  660
 661 KYGVYTIYNKLKELKEKEKKEKSAIEEMTNGIEKIDEELRIIYDKKSNAAAQKNGCLTTL  720
 721 NSITNSIHANEENVRIASEKIKQIKEKREHLEDYKDKLKVQILQLRNSNVNPDESPKGSV  780
 781 DINALNEQVKKLREELNKVTNEYDDFKNKLELLYQKRSENDSNIYMEEYEDVDIDEYTKE  840
 841 LREKKNNIEKIEKEKMLYEQKIKQISKDMESVKSSLDKIYINEKKHKKRILDLCHQMNQI  900
 901 NEELRILEGKEENIRKKKIILPQGVKDPNEYKNYDKQELSAKLKSITLELKKYSNVNEKA  960
 961 GDRLNMLMSDFNELKKRNEEIGTSYKNIKDMIQHIGKKKDEALEATYLKISKYFSEYFSL 1020
1021 LFKNRKATLVLKKMSEKEYKDTLREASEKRARKKMIDDEAYVDKITGISINITSNEDEKM 1080
1081 SYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALDTIHRDNLSLLLRELAQRG 1140
1141 TQFIITTFRKELLEYCENMYIVRIVDRESYIARGTKKEAYEIISTVLPSHDKRKNN 1196

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 505...633 
  1 asgvlGrvadlisVekgyekAleaaLGadLdavvVdnaeaakkaleelkkarpegatpla  59
505 KENVLGFLIDNINVEKTYVKAVDTVLENHYFTLIVEDMKTAKKIVEFIEKKREEKKKKEF 564

 61 glvrlpa.............................dlidydpelrkalrrlLgqtlvVe 119
565 EFKDFFFgkltivpllnirkysdftypndknmvpliNCVNYNTKIYEFLKSILFKTVIVK 624

121 dldeArrla 129
625 SLECCQNYL 633