Protein PVX_092370 (PlasmoDB link) - New domain RCC1 (Pfam link)

Sequence and domain localizations (colored) at: 55...97 / 294...343 

  1 MGQGQGKNRLIEFLVEKKQKFSLINIKNSAHIKDIYSGPNNLIIIYENDDFEIVGLNNYG  60
 61 QLGLGDKTNRSKLTINPILSRQKVRKVSCGYEHIIALMCNHNVFAWGNNNCGQLGIGNNT 120
121 DEISMPLLIYFQEKVIDIACGKNHSLFLTECEDGNGEGYLDASKVKVREEGGSSPRMMKG 180
181 KKQVGSGCLNGLDININDGEVGSSHGEEGKKEDGDEDADEGAKYCTDSCDDSSAASHDDR 240
241 PNRHILACGCGADGKLGLKREENVYFPKKIELKKKIKITSIHSSYSHNALLTSKGRLYTW 300
301 GGNRNGELGIKSNKSSYKIKKIDIPQNDTVVKVSLGKLYSACLTKNHIFYVWGNNIRGIK 360
361 KMSNMANVRIRHFACNEDNIIILTENEKLFLFDAFKKVQCMNKLLNTKLAHNQKGSNHLI 420
421 KYNFVGNGRNYLYAYISMGTKDDVNIKGDHINVEANCEDHHLVERETSATTNLEEKKMAS 480
481 PVEHEATLGQAEMKGALSCQMYANEGAHFVNTLENGTTQDGASFSGGAGGGTKMGSADDY 540
541 AVRAKKELEKGERYEGGGRDEKRDGVGEGQTEIEDDSFPRESDAKDELEKKQITEEETCV 600
601 DLPLLEVDKDRHSSTFSKFRKSKNREGQNDLYLQGAREGGQKRTNKNGTTKGDNIHHKVR 660
661 DRKRDKKKEAKRRNGVEDHLIQNVGYMKANSINTEDVTMGGDYILKHTEHIINRNRHCLD 720
721 YLSVDGELGLHWDSFGHKKGQNAQRGNKSGGKHRGGHPMSTVGEDQYAQLNIVLLKELTK 780
781 QKKINVVYCHLLNRLQRELNQLREEKKNFKKKISTLQKFANLKRNVAPDGGQENEGVNFH 840
841 LCVGGGAHNDGLADRGGGGGGGGGGDGGDGGNHDRCYDYRYDCHHDCRRENGNNGGTGTF 900
901 SLNQSADLTNFTSENAPGVPNNLQVLDQVAPDLFLKRRDDHNDNPNNIPIFFLHS 955

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 55...97 
 1 GcgenGqLGlgeeveesklvPvlvslsekVvsvasGgqHtval 43
55 GLNNYGQLGLGDKTNRSKLTINPILSRQKVRKVSCGYEHIIAL 97
Occurence 294...343 
  1 dGrVYslGcgenGqLGlgeeveeskLERLlvPvlvkVvsvasGgqHtval  50
294 KGRLYTWGGNRNGELGIKSNKSSYKIKKIDIPQNDTVVKVSLGKLYSACL 343