Protein PVX_092485 (PlasmoDB link) - New domain RCC1 (Pfam link)

Sequence and domain localizations (colored) at: 180...234 / 237...288 

  1 MQKIQNAVRRRSRFFKWDVKWYSSKVKVEKKAGERHNDRHDSHDSHDSHKDIPQDSRPDT  60
 61 RVGQERKYNLWRWGCSGEGIFSSVKVGEKNKMPEKVPNFENAKIEKLSAGCDHAAFIVDG 120
121 RIFTYGLNDKGQLGRSIEEENDQNKSYTLTPREVKTEGNVKFKDVCCGYKHTVAVDVNNN 180
181 LYSWGWGGNFFKGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQHSLVLTKNGKV 240
241 YGCGRGEFGRLGKGNHGDQLFFEEIDFFISNNITVKGISCGHSFSAALSTDGEVYVWGRN 300
301 DYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKFIACGDNHMIACSENNVIFFWGSRA 360
361 WLEPKAITLSPLYQNSVIKKNIDKIEAGGNTYYYSMLLSDNKLYSWGKYNSSCLALGDKK 420
421 NHNEPTLVDSKLFNDEIVCDISCGRGRVLAKTLAAD 456

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 180...234 
  1 rVYslGcgen...GqLGlgeeveesLlvPvlvsrssslsekVvsvasGgqHtval  55
180 NLYSWGWGGNffkGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQHSLVL 234
Occurence 237...288 
  1 dGrVYslGcgenGqLGl...geeveeskvPvlvslsekVvsvasGgqHtval  52
237 NGKVYGCGRGEFGRLGKgnhGDQLFFEEIDFFISNNITVKGISCGHSFSAAL 288