Protein PVX_094710 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 2752...2792 / 3163...3200

   1 MDDLAAAGVKTAVEKNAQSNWTGGNNAEAEGETHAELDSHNCVGNPVGINPKGDHLLASN   60
  61 ERQDDHLEKEQTGESKTNKLIFNKRNHPNSSLKFDQKNVAEMNKYEYAYEREDVFSCEDA  120
 121 FGESVESNNLSSYDEEEREQIDPLNGYHNGQTSNNNRGSERQNCQVIVRIKPRIKTNKLE  180
 181 KVSKLNENDTTGRGVNYEDGKNIKYKKNCLYVHNQNFSFDKIFSEETKQVEVYSYLSDTF  240
 241 LNNLFEGYNCTIFAYGQTGSGKTFTMGFDYMNEFSQSVGILPRFLNDMFKTIERKKRKID  300
 301 FDVSCTYIEIYNEEIIDLIDFKEEDYHDKVSLKNGKKNKKKKKINKNISIREDINKKEII  360
 361 LMGIKNEKVQTVQDVFTILHKGNLFRTTERTFMNDKSSRSHAIFTVNLIQRKKQAAESEK  420
 421 NKGNPPEGNPNCRNEQGAVNQLGEEQKRRSVNGSDVAEEGATSNAAAHTNADEGKKDLNF  480
 481 AKEGNHNGDGLEHTNKADVICSKFHFVDLAGSERAKRTETKGHRLKEAISINYGLLSLSN  540
 541 VIYSLSSNKKSQHVPYRNSKLTRILQDSLGGNSKTVMIACISIDPVDFYESLSTIKYAAR  600
 601 TKKIKNTPVINYDINSVVINDLRKQLFNLNLELKKYKIECKDKSSEGDFTRVKELTSQNK  660
 661 LLLQKVKGLKVKRKKLICLIFYYMGLLKRPNYAPTDGSLRSNVVESVRSCSVGLLNQKGC  720
 721 ITQGGEPCIGGEFPSNDGQSVPGGASAIVHSGDRAGDNAIHITSAPVCKNRTVVPDVPPS  780
 781 GGALSSAPPSGAPPCGGPPSRPHFTMSVDSFFQKRGNLDKEDAANVNSKFSEPGKSTHDG  840
 841 LCSSGMAPLTMKGTPMGDAKSCHSCGLKQSSNEHIVEKNSKKEHDMNVVVSGGSYEVDTC  900
 901 ETCHCVERPSLQKRDDQTVHMNRATHDNRSIFQESVMWWADNANEGDHLTSVPKDPPGEL  960
 961 SPNVMEPPKKDAPKGDTLNGNNSLCTTCQTKNLVEDREDACDSDFNTLEEKYLFVNLEED 1020
1021 KRCVENLFRQFELNRYNERKLRDLNKKYISIFEKNKAYEKKIDELKKMVKRMKRCAKLSS 1080
1081 EGRYGGGKRKKKKAPKGGRSGRSERSERSGIRGRDVGAVVGGAKAGPPNRQNRPDGRKKL 1140
1141 PHSPPQDDNFYPPNCDHFSDVEFEREMKRKMLKHFARKKNLTDTEVSAKGLNSFCAYGTG 1200
1201 GCHEQTRLMDLLHQNLNHHKKEISLIDNPQLNSCLVSAGRHRKVRSRRRRKMLLYENNDS 1260
1261 ASSNFIYSSNNVDLGLFDDTAEVGEIPMGSNGRRGGPTNGEKGTPRGVPDERKKKQVQME 1320
1321 VTDISHPYDHFVGSGKMDDLHFVNCAGGEVNPKWHTSDEEDEKITVEEHSEDDTCESSPS 1380
1381 SSDDRSGRSSGNVSPKFLKNKLNKLQKIIKEDICKIKRVNREKEEYNAKNELLTNSIMSL 1440
1441 KKKLHYLQVSSQNDKNCKKIENMKGEIQRITNEKQKIQKKLNDNEQQIKHLKVDILKMKS 1500
1501 NFLKTSTLLKEEQRKHTNIIRKKENIITKLHEREEHYINKLKKKEEISKQAYSKLLKRNQ 1560
1561 ELNEELKKLKKKGPSGNARRGDRKKGQENRPPEGIIKRNKFDGVSTRVKKVTSDGMRIST 1620
1621 PLRDGDVHHYDHPDDGNNGGGDQHREDATSLQNDDYNASPLSTILSDGVKSLYLNSSPSV 1680
1681 CNPENNLFPSHSFYMFNKSESKFQSSFKNDAKIKNYLREFLKKKKKLSSIKAKLDKEKSM 1740
1741 NRQVRKILQALYVKRKNEDEEGDREQDGSPRRSTPIGVEDKSAQINRTTNEGEDRESSAG 1800
1801 QPMTEQPLRNRVTTAKMEQNVRDCQSDGKDSIPVKENFPPVEDKDGGENPPILLRDEKMD 1860
1861 EEVAYYENKLKESNELLKKLKRDIITKKEEFILQKVVKHLLKKLYFNFNKRKESERKIKS 1920
1921 LKKFIYSENLFISKIYNFFYLTNVANNLTLPIGCNSHLNNHSMVSFYSNQINDPREGHPN 1980
1981 GGFHLTCAERQLKNNNAGLSALLPLYKFDQFKKVLPRNGAANGLLDGRRRNTFSSSMGIN 2040
2041 PTAEVNQNLTNLKKRSYKSRLIENLHLSRFNKRRVVLCRSDNLVESGKNGESGENGKNGN 2100
2101 FETKWGKRYSDGFSLNRMRDAHEGVGLEAKFNGGAPAEEGIHHLPKGYEQINWMPNEGAK 2160
2161 NVNLSALNLLHDNNIFGKSEKGSFIRRVHGDSGGGEDQSVNAMDAVDAIAAVDVDERSLE 2220
2221 QTNHHALPNVRMKRKSIDNCYLYASKQNGDNFLDYYQDVFSRGHYDVNGAKGEEEKTQRD 2280
2281 VTTSDPSQRFLCGKSGGEPYQGAEAPQRESPLCNSKCDQMKSSPIDLCVHPPTANTTIGS 2340
2341 DAFSKGRNEFAASKRLEGRVPHGGCNPPGKKGDHVSSSMKRGSQELNSALTNVRTDGEDC 2400
2401 SSIDTAKKGEGRIGGKYDNGECSAGIGTGMYSSPCGIPIAEESKANLLPSSGRTDQLWGE 2460
2461 NKLDFNLAPRQMSGNGTHKEDGSRDPIEGNHKQEVTTEVGQTVRSLNVSSADGVKKRQPK 2520
2521 VCSIKSKSADGNSRISGGVSNVKRACKEKENKSSDASLDGTNVTREANNTEVRNINSEEE 2580
2581 SQMRSKNTSIDAETKLGKKAGINKLPANQTEGPLHHTVLVQKGDDTSHKAQGAKLQMDSS 2640
2641 STAQWNSRTNRDEPNCGGYGKPNDGGEGTQSNNLQYGINREDFKKIEKIHEESINIFKNK 2700
2701 MNDIGMSSESFGSLHMMEKKIKGNFANSGNYDGDNTMGEEFPLNKGTTQKRYKTLCMKNC 2760
2761 HKYGVSGLCVKGSSSKDLTILSSSINNIKLWDGKKAVWNYDHVNLKNEKSTFINSLIVSF 2820
2821 QNNCFFAGINSYVHLFDIRTNPVSLQKYYYSDKNDGSLLISLLNDKSDYVPFLLQNGCTS 2880
2881 TFSGVAADGDYTYGGVQNVIERNAVEDAVGQEPWDTSLKHPLSREWQEENVTSAIHENGS 2940
2941 RNVASATHENGSRNVASEAHENGNKKMGSATHQSCHERGNQTSTLCHGKADAAEEDARDK 3000
3001 LKPIRDAENFQSEYCICACGNENFIKVFDIRKNDDNMWLAKIPITNKIEYITQIPMKKNG 3060
3061 KNITKDSNILKNIIIASRDKTVKIWKKGWVSFYPPSYDWCTSLSNFNLSDLMINKGTPSL 3120
3121 QEESAEYANNLFNYDSLIVSGSRDSHLRFWLYATDSTTNEFNRFMKIVKNAHMVDITSIA 3180
3181 KYQTSGLVTADRDGFIQMWDCNLSVNDNEKALLDMDIYSSQLNLAVNKMGKTLRHSPNAI 3240
3241 NKVVCYENHFLTASSDGSIKIFSEK 3265

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 2752...2792
   1 geck.vl.gHtstVtcvafspd..sgpllasgSrgtikiWd   41
2752 YKTLcMKnCHKYGVSGLCVKGSssKDLTILSSSINNIKLWD 2792
Occurence 3163...3200
   1 geck.vl.gHtstVtcvafspdpllasgSrDgtikiWd   38
3163 RFMKiVKnAHMVDITSIAKYQTSGLVTADRDGFIQMWD 3200