Protein PVX_097835 (PlasmoDB link) - New domain MutS_IV (Pfam link)

Sequence and domain localizations (colored) at: 826...916 

   1 MADFSKSNSAGPANKKQASILSFFKTQDGKGKKATGAGGEAAKEGKGDADKQGGQQLNAA   60
  61 MSTLDKFAANAGNEAERSCETGFTAMKEPSEDKRNGCCACAETPQANLFSDDSQDVSRSA  120
 121 VRSSMGKKGTEMKESYDKGYTDNAELSTEEDIIVRKKRKVIIDSSSEDVYDGSNDRSEDN  180
 181 GKNSKRKGPPGNEGVGVDGKLNNLVYEPGKSSTTEETLFTNEQSSKEIINIHRRKGEDGK  240
 241 KSQELDTLRNKLLSMPICLSNDKFRLYVEQYFLYCNTFEFPKWVQPQYVRDLNLRTPDNA  300
 301 DYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMGRFYEIFYIDAC  360
 361 LMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETPKELEQRNKETC  420
 421 GPKDKAIKREINEIFTKGTILHDNMLSSETKYLVCFHFDDIEDLDGGVVDVGVGGVGSLP  480
 481 GSSSQSDRSVKSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILAQLCPAEILYASKN  540
 541 INKEVLSIFKNIPAEPELTAVSSFPNIIASLDEIRKYFETIPPSLEMHREQNSVICAFGG  600
 601 FIVYLRSLLLDKKIFRFCKIEHYDLFKRENYMVLDATALKHLEILETQSGETKNSLFDYV  660
 661 NKTCTNFGARNMRRWICSPLLDCTRINERLDVVEFLKKNEHILSLIRLKLKKLPDIERLL  720
 721 NKICIQASQSERGAVFFDNIVSTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLY  780
 781 EISNTPDRKSLLRKVQGSYPHIEQITNEFLKKIEFDGDKEYKPAEGCDEAIDLINSKEKE  840
 841 IEGELTNILTNMKRNMKISSLKYVHAKYKYEVECPENVPKHFLKHVEITSAKKGFIRFQN  900
 901 DEIKQCVEMLEDIDQEKKDAIYPFFKKMFHLFYAHYEKYVSACRLVSELDCLQAFAFVAL  960
 961 NTPFALTRPVLHPMRRNGSGEGESGEESSGQEVTAEQINQSSRSAVSAVCRGGTAHGKEP 1020
1021 FLILENNIHPVVATLMPNFISNNIYMGCEQEKQSTLLLTGPNMGGKSTLLRQTAISVILA 1080
1081 QIGAFVPSTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNMLKQSTKYSLAILDE 1140
1141 LGRGTSSFDGTAIALSTLEQISDVVKCRCIFSTHYHLLVEEVKHNKKISNYHMSLSIDDH 1200
1201 QEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLAHEKSTLFENVTDEFCKIIKYKNI 1260
1261 VRSLLSAPDGENLGALFRRYRAEFAEFAA 1289

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 826...916 
  1 gfdeeLDelrdlleeleeelaeleakererlgiksLkvgynklGYyievtkkvPkdyir.  59
826 GCDEAIDLINSKEKEIEGELTNILTNMKRNMKISSLKYVHAKYKYEVECPENVPKHFLKh 885

 61 ...rqtlKnseRFtTpeLkeledelleaeee  91
886 veiTSAKKGFIRFQNDEIKQCVEMLEDIDQE 916