Protein PVX_098735 (PlasmoDB link) - New domain WD40 (Pfam link)

Sequence and domain localizations (colored) at: 5...43 / 47...85 

   1 MPLNLDIKKKLNSRIGKVKCVDIHETETWILAALYNGKLIIFDYANQNTIKNIEVSAFPL   60
  61 RCAKFIEKKQWILCAGDDMTLRVYNYNTFEKIKSFEDHTDYIRYIEVHQTLPYVLTSSDD  120
 121 MTIKLYDYENNFEKLCSFENHIHYVMMCKFNPKDTYIFASASLDKTIKIWGVQNNTPVVT  180
 181 KPHFTLTGHTKGVNCIDYSCSGETSYIISGSDDKTIRIWDYHTKQCIQVLSGHTQNVSCL  240
 241 IYHNNLPIIVSSSEDCNVKIWNSSTFKLESTLNYNMDRCWSLCAKKTKNDLCIGYDEGLV  300
 301 VIQIGSDKPIFAMFKNKIIYIKNTDIYIINLQNVSEGDDYNDGDVYKVNKKELGNCDFYP  360
 361 TNVSFHPSGRFICVSGHHEFNIYTSQVLRNKAYGKSAFFVWAHNGDYAIKEEGNKINIYK  420
 421 DFTSYHSFQAPFTVLQLFGGYLLGVKSSNFICFYDWNDYSMVRKIDINVKNVYWNEAGTY  480
 481 VALTTEDTIYILSYLNGEGSRGALKEGNNIISGVAAADGLDPSNKHAAQDEENNFELESE  540
 541 INEAIESGIWIYDSFLYVSKNLRLYIYTKKFIDIYAYIDKYLYICGYVYEYDRIFLLDKN  600
 601 YTFHSFFLPITYLQYQKYVMNKDLASADLILKKIPESLYNKLSLFLEKMGHKNEALNICT  660
 661 DLEKKFELSLSIGNLQLCVDIIKDLEQKENNAFIHNKYKALGDTALVYNDVPMAIYCYKK  720
 721 TNDFSSLLIILSTLGDKLGLEELGTMCVNNHKLNIAFICFFLLHKVNKCVDILLSDNNFA  780
 781 YAAFFARVYKPSLLPSILLKWKEHLNKVYTNAPVMILTPDENPEYFPEYEQAVKCESIFD  840
 841 NVKTVGRTQNYNSLKKLIDLNILEEIKEIGYEKVEDIFLKQFNEEMEKDVQNFDMMNSFG  900
 901 STKKKEEPTQVKQNNNTKGENKAGKKSKKKKEGAATPNKANELAEDQSNVNNSGPNDFSK  960
 961 MEDTDFLNNSDIIDLDNQDGVPPVDSNAGDSKGANQSAQPAQSESSATDEKGQ 1013

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 5...43 
 1 geck.vl.gHtstVtcvafspdgpllasgSrDgtikiWd 39
 5 LDIKkKLnSRIGKVKCVDIHETETWILAALYNGKLIIFD 43
Occurence 47...85 
 1 geck.vl.gHtstVtcvafspdgpllasgSrDgtikiWd 39
47 QNTIkNIeVSAFPLRCAKFIEKKQWILCAGDDMTLRVYN 85