Protein PVX_113395 (PlasmoDB link) - New domain Helicase_C (Pfam link)

Sequence and domain localizations (colored) at: 992...1069 

   1 MKRQPPRASPLAGGANRCPTKRRSKYFLKASRKTPRQESTPSQRTHAGGAGDYAIPVSTS   60
  61 LYNSTILRGKLAGRGATRGVVEEDEAGLSDDTPLERDQTRPQSGSPPPEGDTSLKLKFRR  120
 121 IISTYHTFTNLMRKLKLSNEQLGGHANCSTCSSGSIIVKEGMYGNYFECTQCHERISKRR  180
 181 VEDSLYNEREKLFLQNKKRISFEMETTHSYRIHHFGNTSFAKEFNQMVSDVIKEIITDLR  240
 241 ELKRDRVQYRDIIKYIYRINTSGDWSEWSRWAEVTRFRSARKASQGESHSVFRPTWRCNF  300
 301 SLIRRRYAALLRKRGYAKVKPSGGKEKAEKGEEAEEVAGKEAQNEAEKEASKEAAKEAAK  360
 361 EAAKLLFLYNSKFAKRVEKRRKKNSHSFETLIDRYTQWCINGRDFFDELKYLPLTWKPRR  420
 421 DYIQSGIFPFHLSKDMEEEASFGRLSVNNNNYLCGCVFDLCSYPLMLRYFIFRLYSHCFV  480
 481 YEIPSCVFHFFGHVYPRVRQETRVQKFFLKWRFSSVMRMACAKERHQSDGGPLHRADSPH  540
 541 PAETAKKVGAIESPVACPPEYSSQEDNRITRLYNLDELAKSSYLFSRAELRAHILRHHYA  600
 601 KGKQKVRREIWGEIKNSCLEEIKKRLPRRIQKVILPYQLQSVYFFKEKNGRILIGDEMGL  660
 661 GKTLQAICIFHFFRLYPTLIVTPSSLKLNWACEIEKFLPALDPSKVLVVGGSNDFPRGAR  720
 721 LYRIIIVSFELYKKLAHLLNEINFKLVIVDESHFIRTVHYGKQSQLAKTIKGTLKKTKRV  780
 781 IFLSGTPSINRPINIYHQIKYLINSKRLFCKNKITFGEEFCKKYFCRGQKIFEENLRSWE  840
 841 FHLFLKKTVMIRRSISEVFTSNFPHLKRFFVYLPHGDYTIGSGNPVNSWSPPRCTPSGEE  900
 901 NALQSVGRDSKEGTQSVAPDFTPPNRKTLSEFFQVKIKSKKVEEGLSKVIHSMKYMEEHF  960
 961 PGKKKIIFCYHLTVCKCIEEELLKMIKRKKQTEQVIIDYVVLKGSLSEKEKREKIQFFRM 1020
1021 NDTCQYGIFTICAVSHGLDFTFCHLCFFLEFPVNFFHLQQCESRLFRKNQQFDTYVFYFL 1080
1081 LKNGLGSDYKTWRRFTLCAHSTRSIVDGTEFVAKDLLYENVSGDVPLLSGQSGSRGSGEP 1140
1141 SRRVYSPEEPNGHPPNELSGQPNNKLSGQLNNELKGQPQNVRTARKRKFLFQINTLTNRI 1200
1201 HAYDQNKKTNFPVEHLANGVGDHKSGTLLKKCAAKFLQNYNKLSTNEKKLIEKKKCDMHI 1260
1261 SLLRHLRDGENETKPLKFERYIKNFAARDKTYVKTYLKNSFKGKLQVFYYQEYDEKRNAV 1320
1321 KCLHCKSELPPCTSAIVGEYNVMKYLQDHSDSATIEKFHHEFETIKLQSCNVKNIFICDE 1380
1381 SNMFCEGKCRKFYFLKKSSNSIRRLIYERDKGVCNICKLDCTNLIRQIKNQKYFPINEKI 1440
1441 DYFIKRYPLFIEDINHLTHILEKPMEGHIWNVDHILPVFRGGGEASFDNLQTLCTFCHKK 1500
1501 KTKDDFKKRAERGNPVESAPPG 1522

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 992...1069 
   1 llk.pikvarlhGglsqeeReeilekFrngks..kvLvaTdvagrGiDipdvnlVInydl   59
 992 TEQvIIDYVVLKGSLSEKEKREKIQFFRMNDTcqYGIFTICAVSHGLDFTFCHLCFFLEF 1051

  61 pwnpesyiQRiGRaGRaG   78
1052 PVNFFHLQQCESRLFRKN 1069