Protein PY00549 (PlasmoDB link) - New domain SMC_hinge (Pfam link)

Sequence and domain localizations (colored) at: 514...642 

  1 MYIKQIKLKGFRTYKNETVIEFTKGINCIVGFNGSGKSNILMAIEFILSDMSEYKQVFLH  60
 61 EGIGNAVRSCYVEITFDNSEKYFSMFKENEIKIKKVLENMKCEIYVNDKNISKSQYVELL 120
121 ESCGLCVNNLYNIIKQGQIIKLSNMKEDEILNYLKSILGAKIFEEKKKDGLSMLRECDAK 180
181 KETIQKEFNEMNTKLESLQEEFQKFLEYKKLEKEKVHIEYFLNEINYKNIYEETQILKSK 240
241 LQELKNKTQDEDNALNLSNTSKSEYTEKLNKMKLEIVTIQNEFDRTISEEIQNKRNIIQL 300
301 EILIDEKKKEKSLKESKNKNQIENINQINEFILRVNEKLRALKDVITLKEKEIENKNNEI 360
361 NLLLSKNMPKNSNDANYSHNIKQIEKMINDVNTELSGLEKEIMKNESYLKELKEESKKLN 420
421 KDVKENEQLSEKYITDINELNKKSENCVEEKRKFQRKISEGTSNLNNIKSQLIEVNGKKE 480
481 NHVYVYKYEEMVKSSNKEIVKMVDIILKESNINKESILGFLIDNINVDKNYTKAVDTILE 540
541 SHYFTLIVEDMKTAKHIVEFIEKKREEKTNKEFNFRDFFFGKLTIVPLLNLKKYNDFTYP 600
601 NDKNIIPLINCVSYNSKIYEFLKTILFKTIIVKSLESCQNYLEDNYNCVNIDGDYVSLKD 660
661 KKKYGVYTIYNKLKELREEEKKEKTNIDNFSNNIEQLDEELRIIYDQKSTLLGQKNGCLS 720
721 SLNSITNNIHINDDNIRKANEKIKSLQEKKENIEDYKNKLKMQILQLRNNSLNPDESNKG 780
781 ENDITSINDEVKKLKEDLNKIRNEYDDFKNKLELLYQKRNEVYPPFLRILENAKKCILLN 840
841 FVHFFRGKEENIRKKKIILPQGIKNLEEYQSYDKQQLSSKLKSITLELKQYSNINEKAGD 900
901 RLNILMSDFNELKKRSEEINTSYKNIKDMIQHIGKKKDEALEATYIKINKYFSEYFSLLF 960
961 KNRKASLVRKQ 971

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 514...642 
  1 asgvlGrvadlisVekgyekAleaaLGadLdavvVdnaeaakkaleelkkarpegatpla  59
514 KESILGFLIDNINVDKNYTKAVDTILESHYFTLIVEDMKTAKHIVEFIEKKREEKTNKEF 573

 61 glvrlpa.............................dlidydpelrkalrrlLgqtlvVe 119
574 NFRDFFFgkltivpllnlkkyndftypndkniipliNCVSYNSKIYEFLKTILFKTIIVK 633

121 dldeArrla 129
634 SLESCQNYL 642