Protein PY00626 (PlasmoDB link) - New domain Rad50_zn_hook (Pfam link)

Sequence and domain localizations (colored) at: 999...1055 

   1 MYLCKLLTNIYICIYIFFECVFVNSVFYKMTTLDKIGIQGIRSYCDEYPQQLEFSSPITI   60
  61 IYGNNGSGKSTIIECLKVNCTGDFPPNAEKGKSFIHDPLISNKMNVRGKIDLLLKNYNNK  120
 121 KIGISRSFSLYYSKDKQNRIKHTFRSLDNNIIIKKDKGDDIIITNKCVDINCHIPKLMGV  180
 181 SKALLENVILCHHDESLWPFSESTKIKKKFDELFGDDNFSKILEELVKCKKKMNEILKKK  240
 241 NYELINIKDSYEKKKNIFLEIEKNQAEIENEKIFIQQEKEELKKKTILLDQFKNKNNILY  300
 301 KISSDIDTYFVLYERHQSDIQQYKNMKEIYEESSSELEKFSDLFKTDLIKCNELIEKIND  360
 361 EIIKLEEESENCLNAYACGNLKECSEISDSIFCLEKKEKQLLDMIKNIYDLDICISNNFK  420
 421 CKCVRNILLKEHKKIILLAQNSFHTLTFIKSVDISTRKDELISSCDWNEISSMKKEDSGN  480
 481 SKKCITNRGRMIKKIDLNFLKDLDLNSYQSFFDEYKEFEKRHKKRIKKIYNFIRQKKIQS  540
 541 RENKMEKNKNKNILKIKKYQEKLRKIDKKIDQIEKYKKQLILLKSNDDIYDKKFKNLEKM  600
 601 FQLKNIYDTIILNRYDGCNDDNADNDDDDDDADXDDDADNDDDADNDNNICTFKEQNEKN  660
 661 IKKKXLNEIVNLKNKLNKVLIYITNVNLLCEYFCDFEKINKKIIFFFRHLFLYLSQMKIF  720
 721 LKLCNGIQKKKNLYDCIKRLGILDFEENEFYSNFKNDNSQMSIIMSKIGEKKETDKMFIP  780
 781 MIHNNLNVKKEEDNLHTFEEKTVKLENKIEKNTKLKNLISLENITNCVNKNEDILSDNLI  840
 841 KLESKKRVTAHFEELENGMKKKQRQEQDKFETVQKMKIEKIEKISKIEKINKIEKGENET  900
 901 DCETKLEWSQEMGIVERGLCEYAEKYEKKIEEYNIEIKKIKDKIVAKSNETIEADKEMKN  960
 961 CLENIKNFKGMLEKLEIKNVSNFLDIFYQTIKKIKESKRNLNWLTRKKDEKIINIDKING 1020
1021 SKFCNICKHNLEENEMNKIKTDLNNEIKEIENEIEEENTKLNNLKKNKKKYLPLLKYYYN 1080
1081 YIHPISNQINNLSENKINEIKNDLTNLQEHLNIYLNKINXTNEKYKVXHKIFNIYPNLIN 1140
1141 FKREIVKHAKKLFLCKDQIKNVLNFFKEHNSDNYDTLFGKNEFYNLSGKFAKLMENSDDK 1200
1201 DSSKETTNLITKLKEVFEMFMRIIDKKEYFKYITNIIEHNYDNILCTFSIKNALLFINND 1260
1261 DNIYTKSNSFFFSKFMKLLSIEIKEKIEQTIISNSGVDTNEDTRLENKEDVEREKFNLKY 1320
1321 GDKENDSKDFEIFFNNEERYSLINKLIDVEKKNKTIEKLCNELIVYIKKEEIKTEEEIQM 1380
1381 LCRMEFLINDKKIYVNKKIKELEDFINKENKIKECIKKTDIFLSYYLEKKKEIDKFINFN 1440
1441 NVLIKKYNKKNKDIKKKIINXKYGILFENKNYFLKSCIINTICNNLKLTKSEKEKQESNL 1500
1501 KNIREQISNNELIKNESNEIINKIKKKKEQVLCLKEEKINIEKMHHNVVINTNLKKIHET 1560
1561 FLKQQEQFLELLSEFRENVLRRKRDVDVITQNEINSSDNIDVTIKKKIETEKNIINNQIN 1620
1621 EIEFIIKTFQINYQSNVDIHKFLRDTFDYLMYKKKLEKIINTEKEILKSKIEECKKCITD 1680
1681 IQIKEGELQGKICLRNEYVEKLKKDIKSGSYENIDNEYKKKLIEICVYKNVIKDLSNFHN 1740
1741 SFDQAIIKFHSLKMQEINLSIKNLWRRVYNNPDIDYIYIKSDLEIENNEKINQRRSYNYR 1800
1801 VVMVKDNCELDMKGRCSSGQKVLSSIIIRLALAESFSIKCGILALDEPTTNLDKSNSKNL 1860
1861 ANLIANIVDLRKNSSSFQLILITHDTYFVDALSQYGLTNCFYKVRKDRNGYSQIVKVEK 1919

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 999...1055 
   1 galesekaelkkaieeleeeess.cCPvCgReLteeekkelikeykseldrlpeelk   57
 999 RNLNWLTRKKDEKIINIDKINGSkFCNICKHNLEENEMNKIKTDLNNEIKEIENEIE 1055