Protein PY01028 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 417...492 / 557...621 

  1 MKYEEMKRKKREEDTNSDSSSSSDDRSSSNESDIKDKKEYIEKMEKLRRERRRDRSRDRI  60
 61 RDRSRNRSRDRSRDRGRDKYKLRGTYTNVEVRIKSSKHRNISSDDEKIKENKKHKRRERD 120
121 DNKTKDSNSSDDSEEEKKSREMNEKKSREMNEKKKTIEKREEDEDEDENESENKNENKNK 180
181 NENKNKSESDDSNEESDQSSVRSSSESGRERKKMRSHSRSSYRERRRRKHRNSDKRSRRD 240
241 RHRSSERRRRKRRRDRERDRERDRKYKRRERNYKFDSPPDSESDNNNSDNDKKKKKKSNF 300
301 SSENTNNNILENNNLLLNATNTILSNAGKIIPNINLNNPSSLLNIFASNSSQSGDNLIIN 360
361 PGNILLEEKKNITLNKNPLNLLLNTQSLQQLYKTAFGIPELGLSTIDANAEKTARELYVG 420
421 NIPQNIDIQEIVKFLNTCLLILYNKENENENICLKACIRGDTRYAFVEFRSLQDTSNCML 480
481 LNGIYFYTNNLRIGRPKTFPIEYTKLIPPATIPTIDTYYLSQGLVGIKAFAIFHQNKDEN 540
541 KNEYHHLPVDMIKLQKLCVSNISKNNETNKIKELLEAFGDIQTFEFFEGEENSDTYICLV 600
601 EYNNIENAIQAHKILNQNTSYKIQFEYEILNDPTINQLVKKKYMQNKNSILSQQIPTKVI 660
661 VLSKIATFDELSNPEDYKEISEDIKIECEKYGSVIEVVLPIVSLDTYNYLTKKSEQEESK 720
721 MEEMEERSESKLDGGEPSPCKVSETDEQFNSDRVEKAEANNQDEQIDNVEEHPYYDLSSI 780
781 GCAFIYFETIEGATKTRKELSGRKFGANIIEANYYSEKKFIMKNFKNVKYNFKKSHSSLF 840
841 NLNLKLGNCAYSDGSDED 858

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 417...492 
  1 lfVgNLppdtteedLkdlFskf............GpiesikivrDkGfaFVeFedeedAe  59
417 LYVGNIPQNIDIQEIVKFLNTCllilynkeneneNICLKACIRGDTRYAFVEFRSLQDTS 476

 61 kAldlnGkelggrelr  76
477 NCMLLNGIYFYTNNLR 492
Occurence 557...621 
  1 lfVgNLppdtteedLkdlFskfGpiesikivrDetgrskGfaFVeFedeedAekAldelg  59
557 LCVSNISKNNETNKIKELLEAFGDIQTFEFFEGEENSDTYICLVEYNNIENAIQAHKILN 616

 61 grelr  65
617 QNTSY 621