Protein PY01096 (PlasmoDB link) - New domain MutS_II (Pfam link)

Sequence and domain localizations (colored) at: 9...148 

  1 MEDGTKLLVSLISEFRNNIRYVGICIYNNTTNEFSLSEYIENDHFTTLESILIQTNPDSL  60
 61 IYLPCNNILDNKRINLICNLCEIKLCELNKDIFQIMSIETDLEKLINVNDDVKNYVSFLN 120
121 LTLGCKALSSIIKYLNLLNEDSAINKCTLKWYNISKYVKLDKAAICSLNINTYISKEQKN 180
181 GIGGSQQTLSQNHGGNTMTLYKFLNKCKTKIGERKLLKWIMHPIRDEKKINQRLDMVEIM 240
241 NDDQALRSMIQGEYLRKVCDLDLIIKKLKIANNIVKNNNMSDNHGAKQNRSFGNSNNKCT 300
301 IEDLVKLYDTVIASKNIYHALDEYNNGTQKKNTKKTLEENFIIPLKSIIISLTSFLKLIE 360
361 LTVDFDQIIKNQFLISPNFDDNLMALSKEKEEIYKQILHHRSEVEEDINYLKKGDKQSKN 420
421 NKNISSNNSGMKEDVKLIDCNTNVFLFRAVKKDIIFIQQRKKTYNQVRVNKNEILFNTNK 480
481 LRDLCKQYQYVLHSYNTSQEHLANKAIEVASSYWEPFNKLSKIISQIDIFCSFAYVISQC 540
541 ISTYVRPIVEQNGKVLEIKNSRHPLVEANYLQIKNFIPNDIHMDKENNRLNIITGPNMGG 600
601 KSTYIRQIAIISLMAHIGCFVPSTYAKIPIFSQIMCRIGSSDIQLKGISTFFSEMIEVSA 660
661 IIKNADSDTLVIIDELGRGTSTYEGFGISWSVANYLLNNIKCLCLFATHFHEISNLEDEH 720
721 AAVSNNHVSAKIDEAKKKISFLYEIKKGFADKSYGVHVAQIAKLPQKVIDKSFEKSKELE 780
781 SIENKHYFKNKLKSNNDNNSIEYDKAKTEMHNKCEAYLKEIFKANNEQEFISLFKKNKGF 840
841 LVELFKNDNFNSL 853

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 9...148 
  1 NylaAiskgdgnryGlaflDlstGefgvsefeDddafeeLlaeLsrlsPkElLl...pes  59
  9 VSLISEFRNNIRYVGICIYNNTTNEFSLSEYIENDHFTTLESILIQTNPDSLIYlpcNNI  68

 61 lsesevlelrdrvgrrptwefelesaeedlledf........gvedldgfeelplalcAa 119
 69 LDNKRINLICNLCEIKLCELNKDIFQIMSIETDLeklinvndDVKNYVSFLNLTLGCKAL 128

121 gaLlsYlketqkrrnlphlq 140
129 SSIIKYLNLLNEDSAINKCT 148