Protein PY02936 (PlasmoDB link) - New domain MutS_II (Pfam link)

Sequence and domain localizations (colored) at: 426...579 

   1 MGEVNKGSGGACSNKKQASILSFFKTQNNKIKKENSMKDTNDKACEEKESKIDILNNFVC   60
  61 AKTDDNSFKNNKDMDSDRKGELFSNINNFDGCEKSDNNNNNKNGDSVKYENNGYIMDNAE  120
 121 ISTEEDIIVKKKRKIILDSSYDDDDDCESDSNDKKKKKKENFVKNEGGVDNKLKNLLYDE  180
 181 NKKGEDILINSNKEDGSNNNRDIKYVQRKKIEDNKKSQELDHLRNKFLNLPITLNNDKFR  240
 241 LYIEQYFLYCNSFEFPKWIQPEYIRDINLNAPDHPNYDSSTIWTPPQDHQWAIEYKQAHY  300
 301 TPGMQQFWKIKSKNFDKIIFFKMGRFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQS  360
 361 LHLYAKKVINSGHKVVVIEQMETPKELEQRNKTSSGPKDKAIKREINEIYTKGTILHDNM  420
 421 LSAETKYIICFHFDDIEDIGDDDNNNNNAGSQTKCNFGFVVSDVATSYISVGYCNDDESR  480
 481 IELRTLLAQLCPAEILYCSKNINKEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYFE  540
 541 NIPKALEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFCKIEFYDLFKKDNYMVLDATAL  600
 601 KHLEILETQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKINQRLDVVEFLRKN  660
 661 DHILSLIRLKLKKLPDIERLLNKICIQASQSERGAVFFDNIVNTKLKEFVTFLNAFKEID  720
 721 NMLIEINSIDSEEDLIPTRLFEITNTYNKISKNNIKGNYPEIDKITNEFLEKIYFDGEKE  780
 781 YKPADGCDDAIDAINKKEKDIEKELNNILVDIKKILKIPNLKYVHAKYKYEIECPDNVPK  840
 841 SFLKEVEITSVKKGFVRIQNEEIKNLVEMLEDIEQEKKDAIYPFFQKIFHLFYEHYEKYI  900
 901 SACRLISELDCLQAFAYVALNTSFPLTRPILHFMECENTMDNKSDDPNYGDDLNCEIEKD  960
 961 GKMGSENASKEKKPFLILENNIHPVVATLMPNFIPNNIYMGCDKEKETTLLLTGPNMGGK 1020
1021 STLLRQTAISVILAQIGAFVPSTYCELTIVDKIFTRLGSSDNLFEGKSTFLVELEDISNL 1080
1081 LKQSTKYSLAILDELGRGTSSFDGTAIALSTLEQISDVIKCRCIFSTHYHLLVEEVKHNT 1140
1141 NISNYHMSLSIDDDQEKIIFLYKFIKGICPKSFGIHIAKLAGLPKEIIELAHEKSLLFEN 1200
1201 VTDEFCKIIKYKNIIRSLLKASDDTTLAAIASLHSVMIWGKVLQIKKEQFFSYLENIIQGR 1261

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 426...579 
  1 NylaAisk...............kdkgdgnryGlaflDlstGefgvsefeDddafeeLla  59
426 KYIICFHFddiedigdddnnnnnAGSQTKCNFGFVVSDVATSYISVGYCNDDESRIELRT 485

 61 eLsrlsPkElLlpeslsesevl.vaineeesqkllelrdrvelesaeedlledf.....g 119
486 LLAQLCPAEILYCSKNINKEVLsIFKNIPACPELTSVNSFPNIIASLDEVNKYFenipkA 545

121 vedldgfGlalcAagaLlsYlketqkrrnlphlq 154
546 LEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFC 579