Protein PY03466 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 1042...1105 

   1 MTVANNYHDHSFFYLNNRTMLEEELTYFQSNDLSPEPTATIDNKNLGDYKTSADTFNSNE   60
  61 NNKNDVLMNATLNGIKINKVPTSSSVVNNNNMDISDRQNDTNIIDKKANKRNNELGKNGK  120
 121 VVINSNNTKDNINSLNKIKKNKINNTNNNNLSNNKNGININSKNSSKNNISNYDNINGMT  180
 181 DKKKRNNSVNSVKRETLDEGIECNNKRLDNNGNCNYYNNTHEKVAHFFDDNNRRNNNLQF  240
 241 SQKCARDMANEQNSNVVLHNNEKGDHKNINKRREDKNMNMNLLNNSIIESSSCNMYNEED  300
 301 FKNFDSSINNFNYVHSINNKLDLKDLNNIMKYSNNLDKNKQLYGYNDSYKVCCTKGNNNE  360
 361 GMKMSENNLMHNYSYTDCYKNDNIIENSHRKNETNGTNINTCSTGNNIYKNIEKNNNNNN  420
 421 SRGFNHNCLNSSDDNICNNKNCEKNADNNINENNSTNNDGIGNCDNRKHMEENGKNDHGS  480
 481 EGNDDKGDNKNKNKNTNNSKNKGNNKSNKNKNGNKKNKKNGNQNVKNNPNNNGEDKTDQK  540
 541 NDTPNGKYLHGNTNMTNNKTLKHNTETNNISVTPSNKSAIGNSGSKKNGNNLINLIISDK  600
 601 YSNVVPASTTNTNNNHGNISDNCNEIFEKNKCACIESNSILFQDRDIKYGEKNERIIMCD  660
 661 NDNKVTNAIDENKSNDIVNLNNTINLLKNNIYNAFNDTFNEKTTESIYFSKKTSNNDVDR  720
 721 IIENTGNLKKKKKKIQNNNIIDSNNMSTFLSHTKIPIFDAEMEKKPGMNQINQNILQNKF  780
 781 GLNDERENNSMTNNTYTSTSINDSSITQLHNGMKLSLIKTYDINKSVDNSIANNSGLNIN  840
 841 MSNNTLNTTNQSTEMNENTSTRFSQNNSLNQHKETNINYNRYNNEKNAKENSNSLNLRKI  900
 901 GNNNMCVERPVILNNSQMLQAFMQGRLCLSCDSLDHPMPLCPNNSFVCPNCHNISHRGND  960
 961 CPMKCRFCLKYHIGISIMDCLKKARIQNEKKLLNKGKNDINNNSNENNNKIGKNNKNNNE 1020
1021 KTNVGPRFDITTRPDNSYGRSVYVSNLSDEITNIQLRDAINNQLDNGFVVNIDRQNGYAF 1080
1081 VELSNLNSTFQLVQRSININYKKLKIQFKKTGQFLIPDNLSFNSNNVSQPFNLNNNENTQ 1140
1141 NKLNKSCSNAHVSNKNSSTTNNASNLGTIQNNFISNHIHFDFSTQIKDSHMKTNANIVNN 1200
1201 ITQNDTNNITVNNSSNNITNPGNNNCLLHLDNMEKENGCSSKFYYETQRKSQLQQFNQTN 1260
1261 NLKKYKEKDINNLCNNIGGNCNGNIIDAHFSSKVFENIKQTAQLNERNEGGNNLLCNNSN 1320
1321 KNIKFEKIGINNYCNKNGNIVDSCSNYQIKDLSNYYNMNKNNGKSDNLIKQNNLYDFMSF 1380
1381 EDENILNDYLKKKNINRNNNISPMDIANMEERNNHNFNDNMFLKFINHITNDQNKLNNTI 1440
1441 INERTKTTNSTINNNLDTLLNSHLFNNRSLLLKENNNNYNKTIEDNNVPDLSSSNIYLKN 1500
1501 DNNLTEYNSSTDDNNMFQKYIHENNKLMDSSTTLDIKSIIDNAIEINHGTIGSDEMNFTS 1560
1561 TINSNSASSNNSGCSYSNGIHKADTREYFADENSYNMTYMCSNNDHNNLTKNNRRSIYIN 1620
1621 NNNNIQNFKREIEQDKLFNQTNFSFHTFEDDKNCNGEKGINQFFWKECNNNNSNSNCGSG 1680
1681 NNDGDILSQGQTGYKNICNDILYRTNPIYDIYKKVNSIKNNSPSIDNCNQRACEGNYNFS 1740
1741 NGVENASSNNFDNVNYDFKTQNNDILFNNINNEKTEDIHKLNNDTIHYNQHEQINFTDID 1800
1801 INKIKSIFNNQNMEMLNNNSYMKNMKYKEIDAIEKDLESHIKVLWNLRKIKLGESYNNTK 1860

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1042...1105 
   1 lfVgNLppdtteedLkdlFskf...GpiesikivrGfaFVeFedeedAekAldnGkelgg   59
1042 VYVSNLSDEITNIQLRDAINNQldnGFVVNIDRQNGYAFVELSNLNSTFQLVQRSININY 1101

  61 relr   64
1102 KKLK 1105