Protein PY04912 (PlasmoDB link) - New domain SRP-alpha_N (Pfam link)

Sequence and domain localizations (colored) at: 23...213 

  1 MIDVINVFNKGGIVLWSYNFYEIEENIIRTIIKTGLIEDRYEEFSNKYNKYCSKWKFIND  60
 61 LDIVILIVYQGIQNSVYLDNLFNKIKKQFIKLIPKNFNFFEHNLPINFDKQFLKILEESD 120
121 KAMERSSPDSGNKNCSNNNTNGENGKNGENGKNGETKKNAREWELNKKITKKDIEKLDYS 180
181 SKNENKNNSNEIVKYEGEFDDSSDSSTNENKNGIMSQLNDSILKIFSSTNTIEEGDIEKI 240
241 LQDIKTKLLSKNVASEICDILIETMKEKLIGKKKTMFSLNVKKTVSTIFSDTLQSILIPK 300
301 DSVDVLRSALEAKSLGKLYSICFLGVNGVGKSTNLAKVCYYLKTKGNLKIMIAACDTFRA 360
361 GAIEQLRIHAKCLDVYLFEKGYGKNAAGIAKDAISYAKKEKYDVILIDTAGRMQDNEPLM 420
421 RSLGKLILINNPDLILFVGEALVGNDAIDQLKKFNQTLIDATCDTHKRTIDGIVLTKFDT 480
481 VDDKVGTALSMVYLTGKPIVFVGVGQKYTHLKKFNVNMVVKALS 524

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 23...213 
  1 lkgspvnaLIrsvlLeERsvnnsfytddYTlkyklaNelgLVFVvvFQkllhLaYvdkLl  59
 23 IEENIIRTIIKTGLIEDRYEEFSNKYNKYCSKWKFINDLDIVILIVYQGIQNSVYLDNLF  82

 61 sdvhqlFkel......YdeielyDdFDfqllRveaEAeeeemkkeeegvasmveteNsae 119
 83 NKIKKQFIKLipknfnFFEHNLPINFDKQFLKILEESDKAMERSSPDSGNKNCSNNNTNG 142

121 ksgpendlsKKgekkKkpRvWDlg..gteedqakLDfSsdnedvdgtnqGklkdgDvvse 179
143 ENGKNGENGKNGETKKNAREWELNkkITKKDIEKLDYSSKNENKNNSNEIVKYEGEFDDS 202

181 ddSdsEdDdep 191
203 SDSSTNENKNG 213