Protein PY05280 (PlasmoDB link) - New domain RRM_1 (Pfam link)

Sequence and domain localizations (colored) at: 16...81 / 473...540 

  1 MTKKYKNDSPIDKHKVFVRNIRENDVNKLTERFEKECKKYFFFKNKTNSTKSAICIFHNE  60
 61 EDATNFITKYNNSKDFSTKIMCEFAIKKKHDEKNLVSVLYNRNKINYPNSIKIYTNCDIG 120
121 NIIILNYLKSIYLIKKKILLNCENNKSIDKKNQINKNQINKNSNNSNNNNNDDDDDDDDE 180
181 EIVIVASSEKDKKFEEIVINIEKQSNINKNNIFKKINNLKFKDNKNDESTSYFEYVVEFA 240
241 NFNLASTFYQFINKNEFQNYLKNNDQNIENENLFFFHELCLLNTEHKMVILKNLNRKCHT 300
301 ENIQKLFKNIEKNIKINIPKKNDKKQGYAFVTFSNYKSVEKALLLTNTILCGNKIIIEKY 360
361 NKEIKLLNGKSHQDTENKSVEPFSYYNSYNNESQENDEEDSDNKSDETDXNIDNDNSDQN 420
421 VSLLSKKRKLTEYDENQTGSKITKIGGDKIGGDKIGGDNKRDYKKDVEEGKTIFITNIPT 480
481 ETTNDEIKEYIEKNISKDYIYIKTCRNDYKKIYVFVKLKKKIDADNFLKKIGEYNSEEDE 540
541 QMNGNENENENVIDQFYNNANKKKKEKLKQILLNENQNLKHTDILYFKNNYLMIKRAVPN 600
601 DIIKDKKKSPEKKEKKEKKKNPISNNIHLINDNDVNNENVPSNILLRNKKLLDKKTELLK 660
661 NKNFVINPCRLYIRNYPLVVEQNIFRSLITKHFTPIFMKKFKLKKKEAFKKANEVIKKMK 720
721 LMKDNNSNKEIVQDTKVGPIIHNNDNNNDNTMDKGANKNVICFLDINKHENTKQIISLLQ 780
781 NKNIFD 786

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 16...81 
 1 lfVgNtteedLkdlFskfGpiesikivrDetgrskGfaFVeFedeedAekAldalnGkel 59
16 VFVRNIRENDVNKLTERFEKECKKYFFFKNKTNSTKSAICIFHNEEDATNFITKYNNSKD 75

61 ggrelr 66
76 FSTKIM 81
Occurence 473...540 
  1 lfVgNLppdtteedLkdlFsk.fGpi.esikivrDgrskGfaFVeFedeedAekAldnGk  59
473 IFITNIPTETTNDEIKEYIEKnISKDyIYIKTCRNDYKKIYVFVKLKKKIDADNFLKKIG 532

 61 elggrelr  68
533 EYNSEEDE 540