Protein PY05524 (PlasmoDB link) - New domain PseudoU_synth_1 (Pfam link)

Sequence and domain localizations (colored) at: 1072...1188 / 1363...1467 

   1 MCHLKKEGKIRKNENNLLNISKENTKNKSISLNGKKREIKDNIDKIELKEKILTNKISEK   60
  61 CIDSLMAYRCNLLKEVQEEENKISTKHICEFHHSNINFKDDKKNQINKMSILKLLISDQN  120
 121 KKGYIRIEKENKIIKKLNTSLCVKKKKKTKNGRINKNNYHSTRANTILKRKSKMKSLLVN  180
 181 KKKNRSNIKSISMIINGNLDNFMNEIGYVSNCNNNGKSHTFENGENGEKNKTKNSKIVQR  240
 241 TNLWEEIHMPICGENYIEVLPDDQKYLCLNAEKKEIKYSVYTKKYIKKKYNQKKYNKKKY  300
 301 NKKKWSIKMKILYKRFLYQTKDNTFLKISQKLNSPEILTKNNLIFYNCDDEKKRYIQNEA  360
 361 ETGTQLNNKMCDQNCVKGDYVKDDCVKGDYVKSDYVKYDYVKGDYVKENSGVTGDTEKDA  420
 421 SMIKKKKKKKKKLALDYGNDKGKSENITHEVKKKNKEKNKKTKCNNIVTKCNNIVTTQKN  480
 481 ETNFTKNKKPLNKFNKTSYSSENVIKLVKPSKRDIQSADIYSHKYESNNQTKLIKMKMSQ  540
 541 NEASTIKGSQNEASTIKGPQNEASKINGSQNEASKINGSQNEASKINYTELNNNIIDEDD  600
 601 DDINKISGENDQDITKNKIELNFCFEDFLSSSLKQKLNHSNSSTNVSSNSDNMKKLKYEF  660
 661 SLDLEKYVLNHPINQISLKKKLKNVESKFVEKKCKDRESENVNETGYVKFCECEIINKXN  720
 721 NGSAKMNMGKIEEKKKKNDNSFKIIKAMDKDKLFCSNPFYRNHIINDKNEMKNKMFMKXI  780
 781 NIKEKISNKIQEIKKKNTSLFRAFSMNNVYKTIFSKDPILPTFENYNTTKNKQKTNSNYM  840
 841 NNRKCNSYELIKTKSLVYKKNGQEKCSGGNRLKIEDFLNNFDKKRNSKNGYIPTNGYIYN  900
 901 NSSSNNGSSNGNNNGYNNGYNNGKNNGSNGSSNKKIFFKRSKSAILFKRNNSKKIYEKKK  960
 961 NILQNFDKESQYGKNCTNKEIDTNVKKNEKTIKKCVSMVNEYFIKNNLPDEPTKNPPKRK 1020
1021 NNYLKNKERIEKLKFERNKRRKEDDEKNEKGGDEKNEKGGDEKNNKFKKYGLCVGYIGSR 1080
1081 YHGCQGQGKEYMTIENEIERTLTKINAVKKTSKGFNYCLSRSARTDLGVHALYNLFVYNI 1140
1141 NIDICENDNNKSEKDFTNSEIKSPKCNDDKKENSDTQNVDVNVDVNVDVNENTNTVNTTN 1200
1201 KDIKNDTFEERKKKEKKFIKLLNSNLPSDIKCFDIYKVTKSFDARKFCSFRLYEYLFPTY 1260
1261 VLSPVQIVPKYEQLFQESVKYIDDYVENDKEEKKKKKIAKGKKNGENEGGGEKNGGENDE 1320
1321 KNEENEEKRPNGKAWGVEKEDIFTIKEEKNDLTDDELNSLFEIFSNYRGYHNFHCFTKNN 1380
1381 IDTTTYRYIKYFDISTVKLYDHNFISIRILGQSFLMHQIRKMITLTVEIFRNATSKNSIY 1440
1441 YSLNTKNYIPILLFPPDGLMLICPYFNSYNEKVCNPPDTPQICFNENEEILKFKSEQIGK 1500
1501 SIIEKINQNV 1510

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 1072...1188 
   1 aaiaYdGtdFtGFqrqpnekstVrtilekalsriggeeemnqlvkiriigaGRTdkgVra   59
1072 LCVGYIGSRYHGCQGQGKEYMTIENEIERTLTKINAVKKTSKGFNYCLSRSARTDLGVHA 1131

  61 ivqvlhfvgpgeltrd.n.k..n.dippedikkaLnaklrddtapaeglylfharys  117
1132 LYNLFVYNINIDICENdNnKseKdFTNSEIKSPKCNDDKKENSDTQNVDVNVDVNVD 1188
Occurence 1363...1467 
   1 aaiaYdGtHdFtGFqrqpnes..kstVrtilekalsriggelvkiriigaGRTdkgVrai   59
1363 IFSNYRGYHNFHCFTKNNIDTttYRYIKYFDISTVKLYDHNFISIRILGQSFLMHQIRKM 1422

  61 vqvlhfvgpgelppedikkaLnaklrigvltapaeglylfharys  105
1423 ITLTVEIFRNATSKNSIYYSLNTKNYIPILLFPPDGLMLICPYFN 1467