Protein PY05628 (PlasmoDB link) - New domain Sigma54_activat (Pfam link)

Sequence and domain localizations (colored) at: 540...653 

  1 MPTIQLVCCKLQSQDLALSNIGYINSGVYNNLKKKIKCNELYGEIGNLVLILKGNDYIGD  60
 61 DEIALNTCQREFSRIQLKERIEINIIDKENKKDIINFIPIDSIDVEVNVFIKPDRQIELE 120
121 DEIVETVFKKHFINHILTKGQILALKCNDILLRCVIKDIKTAELDEIKKLNKNTSTIGSY 180
181 FKLGGDSYRTQDNMYKGNLNERGILFENTECIFTSINDGKLFIESKKVLKKNIIKSNFNF 240
241 EELGIGALDDEFKIIFRRTFASRIYPNYIIKQLGIKHVKGMILYGPPGTGKTLIARQIGK 300
301 TLNAREPKIINGPEILNKYVGQSEENIRNLFKDAELEYKQSGENSLLHIIILDEIDAICR 360
361 QRGSGASTGSGVNDSIVNQLLSKIDGVNSLNNILLIGMTNRIDLIDEALLRPGRFELHIE 420
421 ISLPNKEGRIQILNIHTKNMRQNNKLSADVNIEELAERTPNFSGAEIEGLVRNTVSYAFE 480
481 RHINFNDLTKPINVDDIMISKNDFLNALKETKPAFGAEEDIIDNLLSNGIINYGSQYENI 540
541 ENTCKLLIKQVIDNSNTNLMSVLLHGESGSGKTTIAAYMAKCANFHFTKYITPENLIGYS 600
601 ESGRINYINKIFEDAYKTPLSLVILDNIERLIDYTRIGPRFSNSILQAIMVLIKKKPKKE 660
661 NQKILIICTTSEYQFMKDVGLVKNFYVNIQVPMLNSSIAIKNVLQNRNKNNKDFPENEIL 720
721 KITESNIIKSISIKNLLMIKDMASEAASDCNSVITSEIFLKAYNDCGIFFEDDSYY 776

Alignement of domain consensus (first line) on the sequence (colored line).

Each position reports the amino acid with highest probability; capital letters mean highly conserved residues (i.e. with probability > 50%).

Occurence 540...653 
  1 iieellelakrvAptd....atVLItGESGTGKElvAraIHq..................  59
540 IENTCKLLIKQVIDNSntnlMSVLLHGESGSGKTTIAAYMAKcanfhftkyitpenligy 599

 61 .lSpRadgrdrkFElAdGmPLalVvreDIplLaehFrlgkglspeAleaLlaLe 114
600 sESGRINYINKIFEDAYKTPLSLVILDNIERLIDYTRIGPRFSNSILQAIMVLI 653