Africa France Bioinformatics

LIRMM: Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier

The MAB team is directly involved into the Africa France Bioinformatics project. This web site is developed and maintained within the team and is hosted on the LIRMM servers.

Main Activities:

Functional annotation of the Plasmodium genome.
Expression data analysis.
Phylogenetic reconstruction.
Alignment, pattern matching.
Repeated sequences evolution.

Recent Publications:

Duprat E., Lefranc M.-P., Gascuel O. (2006)
A simple method to predict protein binding from aligned sequences - application to MHC superfamily and beta2-microglobulin
Bioinformatics 22(4):453-9.

Caraux G., Pinloche S. (2005)
Permutmatrix: A Graphical Environment to Arrange Gene Expression Profiles in Optimal Linear Order
Bioinformatics 21:3286-3291.

Contact:

Olivier Gascuel
Méthodes et Algorithmes pour la Bioinformatique
LIRMM-CNRS
161 rue Ada
34392 Montpellier FRANCE
E-mail: gascuel@lirmm.fr
Tel. 33 (0) 4 67 41 85 47
Fax. 33 (0) 4 67 41 85 00

Mailing list Bioinformatics in Africa report This report was written by Alia Benkahla, Winston Hide and several african researchers. Most of them were invited at JOBIM 2005 thanks to the CNRS - MAE bioinformatics program, and belong to the ASBCB.

This site is managed by Vincent Lefort.