Boat access with TLV/TVM company
IGESA
June 12-16, 2017
La Courtade beach - © Hyères Tourisme
Porquerolles Island
France
Download the pre-program in PDF here : Program (PDF) (1534 Ko)
Monday, June 12
16:00 Arrival on Porquerolles Island and IGESA in the afternoon (from 4:00 pm)
19:30 Welcoming drink
20:00 Dinner
Tuesday, June 13
09:00 Welcome
9:15-10:30
KEYNOTE
M. SUCHARD - Phylogenetic factor analysis
10:30 Coffee break
11:00-12:20
4x 20 min TALKS (including questions)
P. BEERLI - Population divergence estimation using individual lineage label switching
D. DE VIENNE - Lifemap, Exploring the Entire Tree of Life. And after?
L. WANG - An adaptive sequential Monte Carlo sampler for Bayesian phylogenetic non-clock tree inference
A. GAVRYUSHKIN - Inferring genetic interactions from competition experiments
12:30 Lunch
14:00-15:00
3x 20 min TALKS (including questions)
A. ZHUKOVA - A PHYLODYNAMIC MODEL OF PATHOGEN DRUG RESISTANCE EMERGENCE AND TRANSMISSION
F. CLEMENTE - Estimation of the sex-ratio in population trees from allele frequency data.
N. DE MAIO - The bacterial sequential Markov coalescent
15:00-15:15 Break
15:15-16:30
KEYNOTE
A. MALASPINAS - A genomic history of Aboriginal Australia
16:30 Coffee break & Free time
18:30-20:00
POSTERS
Wine and posters (1 to 20)
20:00 Dinner
Wednesday, June 14
09:15-10:30
KEYNOTE
E. ALLMAN - Split scores for phylogenetic trees and applications
10:30 Coffee break
11:00-12:20
4x 20 min TALKS (including questions)
E. VOLZ - Scalable relaxed clock dating
C. MUGAL - Time-dependent estimates of dN/dS and its implications for molecular ecology and genetic studies
R. THOMPSON - Accounting for donor viral diversity gives high estimates of the number of HIV founder virions among recipients
J. TRUSZKOWSKI - Reconstructing phylogenies from single-cell sequencing data
12:20 Lunch and free afternoon (beach, hiking, theorems, etc.)
20:00 Dinner
Thursday, June 15
09:15-10:30
KEYNOTE
Y. SONG - The major determinants of translation speed and their evolutionary signatures
10:30 Coffee break
11:00-12:00
3x 20 min TALKS (including questions)
C. COLIJN - Connection genetic and clinical information to understand pathogen transmission
F. FREUND - Beyond the site-frequency spectrum: Low-dimensional statistics to distinguish between coalescent models
I. MAYROSE - A Likelihood Method for Detecting Trait-Dependent Shifts in the Rate of Molecular Evolution
12:00 Lunch
14:00-15:00
3x 20 min TALKS (including questions)
R. MEHTA - The probability of monophyly of a sample of gene lineages on a species tree.
W. RODRIGUEZ - The Inverse Instantaneous Coalescence Rate (IICR) as a new summary statistic in population genetics.
A. GAVRYUSHKINA - Fossilized birth-death process under different modes of speciation and fossil stratigraphic ranges.
15:00-15:15 Break
15:15-16:30
KEYNOTE
S. DRAY - Environment, traits, space and phylogeny: integrating constraints in the analysis of ecological data tables
16:30 Coffee break
18:30-20:00
POSTERS
Wine and posters (21 to 37)
20:00 Dinner
Friday, June 16
09:15-10:30
KEYNOTE
G. BAELE - Computational approaches for analysing partitioned data in pathogen phylodynamics
10:30 Coffee break
11:00-12:15
KEYNOTE
B. HOLLAND - Desirable properties of models for phylogenetic analysis
12:15 Lunch and then farewell session
14:00 First ferry to « La Tour Fondue »
Proposed Posters
> Poster 1 : On the joint distribution of tree height and length under the coalescent
Arbisser Ilana (Stanford University, US)
> Poster 2 : Detecting disruptive sites in tuberculosis genome
Ayabina Diepreye (Imperial College London, GB)
> Poster 3 : Detection of HIV transmission clusters from phylogenetic trees through a multi-states birth-death model
Barido-Sottani Joëlle (ETH Zurich, CH)
> Poster 4 : Detection of adaptive shifts for multivariate Ornstein-Uhlenbeck models of trait evolution with correlations and missing data
Bastide Paul (UMR MIA-Paris, AgroParisTech, INRA, Université Paris-Saclay, 75005, Paris, France, FR)
> Poster 5 : SPECTRE: a Suite of PhylogEnetiC Tools for Reticulate Evolution - The Release
Bastkowski Sarah (The Earlham Institute, Norwich, UK, GB)
> Poster 6 : Demogenetics model for invasive processes
Becheler Arnaud (IRD-CNRS, FR)
> Poster 7 : Integrating results from single marker tests in genome scans for selection : the local score approach
Boitard Simon (INRA, GenPhySE, Toulouse, FR)
> Poster 8 : GHOST: A mixture model for phylogenetic inference of heterogeneously evolved sequence data
Crotty Stephen (University Of Vienna, AT)
> Poster 9 : Exploring the relationship between present-day distributions and evolutionary history using a novel spatial simulation approach
Culshaw Victoria (Real Jardín Botánico, Madrid, CSIC, ES)
> Poster 10 : Co-option of complex molecular systems in bacterial membranes
Denise Rémi (Microbial Evolutionary Genomics, Institut Pasteur And CNRS, UMR3525, FR)
> Poster 11 : Time series in population genetics: from macro to micro evolution.
DEPAULIS Frantz (Ecole Normale Supérieure, FR)
> Poster 12 : A new model that considers dependant sites when infering phylogenies
Dib Linda (Université De Lausanne, CH)
> Poster 13 : A scalable multilocus species delimitation using Baysian model selection
Fujisawa Tomochika (Kyoto University , JP)
> Poster 14 : Statistical Tests for Genomic Time Series Data
Futschik Andreas (Johannes Kepler University Linz, AT)
> Poster 15 : Selection in human, the lost signal
Guillot Elsa (DEE, Université De Lausanne, FR)
> Poster 16 : Modeling and analysing the evolution of gene expression time-series
Guéguen Laurent (LBBE - Université Lyon 1, FR)
> Poster 17 : Estimating Variable Recombination Rates from Population Genetic Data
Hermann Philipp (Johannes Kepler University Linz, AT)
> Poster 18 : A hierarchical bayesian model for measuring the extent of local adaptation from haplotype data.
Hivert Valentin (INRA UMR CBGP, FR)
> Poster 19 : A probabilistic model-based prediction of virus character evolution on large phylogenies
Ishikawa Sohta (Institut Pasteur, FR)
> Poster 20 : Designing efficient phylogenetic inference algorithms by exploiting the correspondence between phylogenies and minimum spanning trees.
Kalaghatgi Prabhav (Max Planck Institute For Informatics, DE)
> Poster 21 : Boosting Felsenstein’s Bootstrap
LEMOINE Frederic (Institut Pasteur, FR)
> Poster 22 : Multidimensional scaling (MDS) analysis, spectral decomposition and coalescent theory
Levkivskyi Ivan (Institute Of Ecology And Evolution, Biology, Bern, Switzerland, CH)
> Poster 23 : Rapid phylogenetic placement through k-mer positionning estimated through ancestral reconstruction
Linard Benjamin (LIRMM-CNRS, FR)
> Poster 24 : Genomic markers of species diversification in vertebrates
Louvel Guillaume (Institut De Biologie De L'École Normale Supérieure, FR)
> Poster 25 : Modeling molecular evolution with fast adaptive divergence at speciation events
Manceau Marc (Collège De France, FR)
> Poster 26 : Coalescent Processes with Skewed Offspring Distributions and Non-equilibrium Demography
Matuszewski Sebastian (EPFL Lausanne, CH)
> Poster 27 : Non-Neutrality in Phylogenies – A Simulation Study on Dynamic Networks
Metzig Cornelia (Imperial College London, GB)
> Poster 28 : Phylogenetic analysis of 3D genome
Mourad Raphael (Centre De Biologie Intégrative (CBI), Toulouse, France, FR)
> Poster 29 : Inferring genomic duplication events
Paszek Jaroslaw (University Of Warsaw, PL)
> Poster 30 : The impacts of eco-evolutionary feedbacks on a two-locus three-species model
Patel Swati (University Of Vienna, AT)
> Poster 31 : Modelling structural constraints on protein evolution via side-chain rotamers
Perron Umberto (EMBL-EBI, GB)
> Poster 32 : Linking Large Scale Chromosomal Rearrangements to 3D Chromatin Structure in Drosophila
PULICANI Sylvain (IBC - LIRMM, FR)
> Poster 33 : The Detection of Demographic Structure and Migration in mtDNA
Rohrlach Adam (The University Of Adelaide, AU)
> Poster 34 : Discrete multivariate boundary mutation models and their application to tree inference
Schrempf Dominik (School Of Biology, University Of St Andrews, United Kingdom, GB)
> Poster 35 : Modeling Trait-Dependent Evolution on a Random Species Tree
Tahir Daniah (Department Of Mathematics, Uppsala University, SE)
> Poster 36 : CONSTRUCTING TREE-CHILD NETWORKS FROM DISTANCE MATRICES
TOKAC NIHAN (YILDIZ TECHNICAL UNIVERSITY, TR)
> Poster 37 : Stable polymorphisms due to seasonally fluctuating selection and their genetic footprint
Wittmann Meike (University Of Vienna, Mathematics And BioSciences Group, AT)
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