Overview
An intensive training week (in French) dedicated to bioinformatic analysis of Next Generation Sequencing (NGS) data.
This training gives you an introduction to all major tasks of NGS analysis from the theoretical (algorithms, statistics) to practical sides.
Program includes
- Introduction to linux and shell commands
- NGS data: current technologies, file formats
- Preprocessing, cleaning, filtering
- Mapping: locating reads on a reference genome or transcriptome
- Transcriptomics: RNA-seq analysis from mapping to statistical analysis (with R)
- Genome assembly: assembly graphs, algorithms, polishing
- Metagenomics
Practical Information
Number of participants: limited to 12
Programm: 50% lectures, 50% hands-on
Venue: Campus St Priest, Montpellier, France
You get a printed or PDF book with all lecture dias and hands-on exercises.
Registration and information: only at https://cnrsformation.cnrs.fr/bioinformatique-pour-traitement-de-donnees-de-sequencage-ngs-lirmm?axe=130
Next open training session: Monday 29/03/2021 to Friday 02/04/2021
Teacher - trainers
- Julie Ripoll
- Benjamin Linard
- Eric Rivals