GeneNest: automated generation and visualization of gene indices


GeneNest is a collection of gene indices for several model species including mouse, Human, zebra fish and others. Each gene indice intends to gather all mRNA sequences available for one gene in a single group. This computation is performed by comparison and clustering of all available mRNA sequences including Expressed Sequence Tags (ESTs). GeneNest is accessible through a dedicated and powerful webserver. The all against all comparison is performed using QUASAR algorithm.

Trends in Genetics
transcriptome clustering cDNA EST mRNA human mouse zebra fish